Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939830.1_cds_XP_016484270.1_75302
CDS Infomation

[gene=LOC107804847] [db_xref=GeneID:107804847] [protein=ankyrin repeat-containing protein At5g02620-like] [protein_id=XP_016484270.1] [location=complement(join(3201..4079,4638..5047,5161..5479))] [gbkey=CDS]
Sequence

ATGGAGGCATCTGTGCCCCCAAAAACGATGAAGAAACAATTAACGGGGAAACGTGAGGAC
ACTGTCTTGCATTCATTGGCTAGAGCAGGAAATCTTGTTGAAATAAGAGAGATTATCGAT
AACAAGGGAAAGGAAGAATTGGAAGAGCTGTTGATAAAGCAAAATTCAGTTGGAGAGACC
CCTTTGTATGTTTCAGCAGAATATGGTTATTATGAGTTAGTTAAGGAGATGATCAACTAC
TATGATCTTGTTGCTGCTGGAATCAAAGCAAGGAACGGATTTGATGCGCTGCACATTGCT
GCTAAACAAGGGGATTTGGATGTGGTGAAGGTACTAATGGGACCACATCCTGAGCTGTCA
ATGACTGTTGATAATGCAAATACAACAGCTTTGCATAGTGCAGCAAACCAAGGGCATATT
GAGGTGGTGAATTACTTATTAGAAGCAGAGAAAAGTTTGGCCACTATTGCTAAAAGTAAT
GGGAAAACAGCACTTCATTCTGCTGCCAGAAATGGACATGTGCAGGTTGTGAAGGCCCTT
TTGAATAAGGAGCGGGGGATCGCGAGCCGGATGGATAAGAAAGGGCAGACTGCTCTTCAC
ATGGCTGTCAAAGGACAAAATCTTGAGGTTGTAGAGGAGCTGATTAGAGCAGATGCTAAA
TCGATAAATATGGCCGACACAAAGGGCAATACAGCATTGCATATTGCAGCCCGGAAAGGA
AGGGCTCAGATTGTTAAGTTGCTGCTTGGGCAGAAAGAGACGGACACTAAAGCTGTAAAT
AGGTCCAACGAAACAGCCATTGACACTGCAGAGAAAATGGGACAGGTCAATATTGCAGCC
ATCCTACAAGAATCAGGTGTACAAAGTATCCGAGCCATCAAACCTCAGGCAACAAATCCA
GCAAGAGAGTTGAAGCAAACTGTTAGTGATATAAAACATGAAGTGCATTATCAAATGGAA
CATACGCGACGGACAAGAAAACGTATACATGACATTGCCAAACGTATAGATAAAATGCAT
GCTGAAGGCCTTAACAATGCCATTAATTCTACCACAGTTGTAGCTGTACTCATTGCCACA
GTCGCCTATGCAGCGATATTTTCTGTCCCGGGACAATACATTGAGTATCCAGAAGACATC
CCACCAGGCCATTCCCTTGGAGAAGCAAATATAGCACCAAGTCCCTTATTTCTTATATTC
TTTGTCCTTGACTCTATCGCCTTATTCATATCTCTTGCAGTTGTGATTGTTCAGACATCA
ATAGTGGTGATAGAAAGCAAAGCAAAGAAGCAGATGATGGCTATCATAAACAAGCTTATG
TGGTTGGCATGTGTACTTATTTCAGTGGCTTTCTTGGCTCTATCATTTGTTGTGGTAGGC
AAGAATGAGAAGTGGCTGGCTGTTGTAGTCACTATTATAGGAACAATCATATTAGTTGCA
ACACTAGGTACACTGTGTTATTGGGTCATAATGCATAGGATAGAATCCTCAAACAAGAGG
AACATCCGAAAGAACTCTCTGGCCAGCAGGTCCTTGTCCTGGTCAGCCTCAGTCGTCTCT
GATTCAGATGTTCTGAACAATGAATACAAGAAAATGTATGCTATATAG

Peptide Sequence

PEP ID

XP_016484270.1
PEP Infomation

PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana tabacum]
Sequence

MEASVPPKTMKKQLTGKREDTVLHSLARAGNLVEIREIIDNKGKEELEELLIKQNSVGET
PLYVSAEYGYYELVKEMINYYDLVAAGIKARNGFDALHIAAKQGDLDVVKVLMGPHPELS
MTVDNANTTALHSAANQGHIEVVNYLLEAEKSLATIAKSNGKTALHSAARNGHVQVVKAL
LNKERGIASRMDKKGQTALHMAVKGQNLEVVEELIRADAKSINMADTKGNTALHIAARKG
RAQIVKLLLGQKETDTKAVNRSNETAIDTAEKMGQVNIAAILQESGVQSIRAIKPQATNP
ARELKQTVSDIKHEVHYQMEHTRRTRKRIHDIAKRIDKMHAEGLNNAINSTTVVAVLIAT
VAYAAIFSVPGQYIEYPEDIPPGHSLGEANIAPSPLFLIFFVLDSIALFISLAVVIVQTS
IVVIESKAKKQMMAIINKLMWLACVLISVAFLALSFVVVGKNEKWLAVVVTIIGTIILVA
TLGTLCYWVIMHRIESSNKRNIRKNSLASRSLSWSASVVSDSDVLNNEYKKMYAI

Transcript Sequence

Gene sequence data has not been registered.